../../tmp/servers/virsirnadb/459120107
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1731 | 1 | ggaagaaaacgatgaaata | 19 | |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 694 | ................... | 712 | 100 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 7036 | ___.........a...t.. | 7051 | 73 |
| NC_014835.1 | Human papillomavirus type 148, complete genome | 1548 | ___....c.........__ | 1561 | 68 |
| NC_014835.1 | Human papillomavirus type 148, complete genome | 6969 | .........tc.g..____ | 6983 | 63 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 3274 | .c..........a..____ | 3288 | 68 |
| NC_008184.1 | Tursiops truncatus papillomavirus 2, complete genome | 2461 | _.c...........g.___ | 2475 | 68 |
| NC_001595.1 | Human papillomavirus type 7, complete genome | 7303 | __..c..........____ | 7315 | 63 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 665 | __.t...........____ | 677 | 63 |
| NC_006951.1 | Erethizon dorsatum papillomavirus type 1, complete genome | 3301 | __...........______ | 3311 | 57 |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 658 | _..g..gg.g......... | 675 | 73 |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 2746 | __.g..........g.___ | 2759 | 63 |
| NC_001593.1 | Human papillomavirus type 53, complete genome | 2732 | __.g..........g.___ | 2745 | 63 |
| NC_008519.1 | Mastomys coucha papillomavirus 2, complete genome | 3114 | __..........ac..___ | 3127 | 63 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 1286 | ..........cg.._____ | 1299 | 63 |
| NC_005134.2 | Human papillomavirus type 96, complete genome | 1950 | ___..c.........____ | 1961 | 57 |
| NC_005134.2 | Human papillomavirus type 96, complete genome | 5823 | __.........._______ | 5832 | 52 |
| NC_008032.1 | Capra hircus papillomavirus type 1, complete genome | 2358 | .........t.._______ | 2369 | 57 |
| NC_013196.1 | Rattus norvegicus papillomavirus 1 EES-2009, complete genome | 3003 | .........t.._______ | 3014 | 57 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 434 | .........a.._______ | 445 | 57 |
| NC_014326.1 | Mus musculus papillomavirus type 1, complete genome | 745 | ____.........a..___ | 756 | 57 |
| NC_015268.1 | Camelus dromedarius papillomavirus type 2, complete genome | 5591 | _..........t.______ | 5602 | 57 |
| NC_010329.1 | Human papillomavirus type 88, complete genome | 6824 | __.........._______ | 6833 | 52 |
| NC_006563.1 | Trichechus manatus latirostris papillomavirus 1, complete genome | 3130 | .........._________ | 3121 | 52 |
| NC_014185.1 | Human papillomavirus 121, complete genome | 6736 | ___..........______ | 6745 | 52 |
| NC_008188.1 | Human papillomavirus type 103, complete genome | 2874 | .a.c.........cc..__ | 2890 | 68 |
| NC_008188.1 | Human papillomavirus type 103, complete genome | 2462 | .........a.c.______ | 2474 | 57 |
| NC_001586.1 | Human papillomavirus type 32, complete genome | 2712 | .........t.ga..c.__ | 2728 | 68 |
| NC_012123.1 | Equine papillomavirus 2, complete genome | 1924 | ___..g.gg........._ | 1938 | 63 |